i pretty much followed the manaul also. i'm not very sure about bikes, but i used to work on cars alot, have rebuilt car engines. so i'll offer the the following:
keep an eye on the plugs, if they're not fouled with oil thats half the battle
don't worry to much about compression until the rings are well past the break in period. for now just be grateful if both cylin. are within 10-20 psi of ea. other.
other than that enjoy your new engine. and maybe think on lending out your compression gauge to someone for awhile.
